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1. Human Whole genome sequencing

   Whole Genome Sequencing (WGS) is applied to identify the somatic and germline mutations, structural variations, copy number variations (CNV) and SNP loci via the re-sequencing of the human genome, to further explore the pathogenesis, pharmacological mechanism and susceptible gene targets of disease and cancer genomes from the perspective of comprehensive application of comparative genomics, population genetics and pharmacogenomics.

   

Sample requirement:

Platform Type

Sample Type

Amount (Qubit)

Purity

Illumina Novaseq 6000

Genomic DNA

≥500 ng

OD260/280=1.8-2.0

Genomic DNA (PCR free)

1.5 ug

Genomic DNA from FFPE

0.8 ug

PacBio Sequel I/II

HMW Genomic DNA

10 ug (for Sequel I)
30 ug (for Sequel II)

OD260/280=1.8-2.0;
OD260/230=2.0-2.2;
Fragments should be  30 Kb for Sequel I,

 60 Kb for Sequel II

Nanopore PromethION

HMW Genomic DNA

10 ug

OD260/280=1.8-2.0;
OD260/230=2.0-2.2;
Fragments should be ≥30 Kb

 

  2. Animal and Plant whole genome sequencing

    Whole genome sequencing (WGS) provides the most comprehensive collection of the genetic variations in individuals of the same species or between related species. The variation information such as Single Nucleotide Polymorphism (SNP), Insertion and Deletion (InDel), Copy Number Variation (CNV), and structural variation (SV) obtained through WGS is used in population genetics research and genome-wide association studies (GWAS) to investigate the causes of diseases, to select plants and animals for agricultural breeding programs, and to identify common genetic variations among populations.

    

Sample requirement:

 

Platform Type

Sample Type

Amount (Qubit)

Purity

Illumina Novaseq 6000

Genomic DNA

≥500 ng

OD260/280=1.8-2.0

Genomic DNA (PCR free)

1.5 ug

Genomic DNA from FFPE

0.8 ug

PacBio Sequel I/II

HMW Genomic DNA

10 ug (for Sequel I)
30 ug (for Sequel II)

OD260/280=1.8-2.0;
OD260/230=2.0-2.2;
Fragments should be  30 Kb for Sequel I,

 60 Kb for Sequel II

Nanopore PromethION

HMW Genomic DNA

10 ug

OD260/280=1.8-2.0;
OD260/230=2.0-2.2;
Fragments should be ≥30 Kb

 

 

3. Microbial whole genome sequencing

Bacterial and fungal whole genome re-sequencing is a critical tool to complete the genomes of known bacterium and fungi, as well as to compare multiple genomes or to map genomes of new organisms. It is of great importance to sequence entire genomes of bacterium and fungi in order to generate accurate reference genomes, to do microbial identification and other comparative genome studies.

Compared with traditional methods like PCR, next generation sequencing (NGS) excels in the way of multiplexing vast number of samples, providing identifications of SNP/InDel/CNV/SV with great reliability, turnaround time and cost performance.

Sample requirement:

Sample Type

Amount (Qubit)

Purity

Genomic DNA
(For Illumina Platform)

 500 ng

OD260/280=1.8-2.0

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Baoding Beibi Biology Science And Technology Co., Ltd
Tel: +86-19912121133
Email: liyuelong2020@163.com
Address: F1, Street frontispiece, Shangke Century City, Wangdu County, Baoding City, Hebei Province, China.
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